🏆 Foundational Paper

Fully automated, sequential tilt-series acquisition with Leginon.

Suloway Christian, Shi Jian, Cheng Anchi, Pulokas James, Carragher Bridget, Potter Clinton S, Zheng Shawn Q, Agard David A, Jensen Grant J

📰 Journal of structural biology 📅 2009 📊 184 citations

Abstract

Electron tomography has become a uniquely powerful tool for investigating the structures of individual cells, viruses, and macromolecules. Data collection is, however, time consuming and requires expensive instruments. To optimize productivity, we have incorporated one of the existing tilt-series acquisition programs, UCSF Tomo, into the well-developed automatic electron microscopy data collection package Leginon to enable fully automatic, sequential tilt-series acquisition. Here we describe how UCSF Tomo was integrated into Leginon, what users must do to set up a data collection session, how the automatic collection proceeds, how archived data about the process can be accessed and used, and how the software has been tested.

🔬 Techniques

🔭 Microscopes

💻 Software

✨ Fluorophores

EdU

🧪 Sample Preparation

🏭 Microscope Brands

Gatan FEI

📷 Detectors

CCD

💻 Software Details

Image Acquisition:
Leginon
Image Analysis:
Digital Micrograph SerialEM
General:
MATLAB Python

🏛️ Research Organizations (ROR)

Affiliated research institutions:

🏛️ Imaging Facility

🏛️ California Institute of Technology

💬 Discussion

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