Abstract
The transition zone (TZ) ciliary subcompartment is thought to control cilium composition and signalling by facilitating a protein diffusion barrier at the ciliary base. TZ defects cause ciliopathies such as Meckel-Gruber syndrome (MKS), nephronophthisis (NPHP) and Joubert syndrome (JBTS). However, the molecular composition and mechanisms underpinning TZ organization and barrier regulation are poorly understood. To uncover candidate TZ genes, we employed bioinformatics (coexpression and co-evolution) and identified TMEM107 as a TZ protein mutated in oral-facial-digital syndrome and JBTS patients. Mechanistic studies in Caenorhabditis elegans showed that TMEM-107 controls ciliary composition and functions redundantly with NPHP-4 to regulate cilium integrity, TZ docking and assembly of membrane to microtubule Y-link connectors. Furthermore, nematode TMEM-107 occupies an intermediate layer of the TZ-localized MKS module by organizing recruitment of the ciliopathy proteins MKS-1, TMEM-231 (JBTS20) and JBTS-14 (TMEM237). Finally, MKS module membrane proteins are immobile and super-resolution microscopy in worms and mammalian cells reveals periodic localizations within the TZ. This work expands the MKS module of ciliopathy-causing TZ proteins associated with diffusion barrier formation and provides insight into TZ subdomain architecture.
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🏛️ Research Organizations (ROR)
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📊 Figures
Figure 1
A weighted co-expression approach to discover TZ genes identifies TMEM107 as a TZ protein.
(a) Frequency histogram of binned human gene co-expression scores, derived from weighted analyses of gene expression datasets using a training set of 20 known TZ genes ( Supplementary Table 1 ). Frequ...
Figure 2
TMEM107 regulates mammalian ciliogenesis and is mutated in OFDVI and JBTS individuals.
(a) IMCD3 cells transfected with Tmem107 siRNA possess reduced Tmem107 mRNA expression (vs scrambled siRNA control; qPCR data) and reduced mean ciliary frequency. Data represents mean u00b1 S.E.M (n=3...
Figure 3
C. elegans tmem-107 controls diffusion barrier integrity and functions with nphp-4 to regulate ciliary and TZ structural integrity.
(a) Schematic of oq100 Indel mutation in tmem-107 gene. Exons denoted by grey boxes (numbers; nucleotide positions). del; deletion, ins; insertion. (b) oq100 mutation disrupts TMEM-107 expression. Sho...
Figure 4
Evolutionary conserved association of TMEM107 with the TZ-localised MKS module.
(a) Phasmid TZ localisations of GFP-tagged MKS and NPHP module proteins in WT and tmem-107(oq100) mutant worms, and TMEM-107::GFP in MKS and NPHP mutants. Bar; 1 u03bcm (all images similarly scaled). ...
Figure images are served from the NIH/NLM PubMed Central Open Access Subset or Europe PMC; copyright remains with the publishers and authors.
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