UltraMicroscope

UltraMicroscope

Microscope • 162 papers

Protocol for 3D-guided sectioning and deep cell phenotyping via light sheet imaging and 2D spatial multiplexing.

STAR protocols 2025

Spatial analysis of cells and their microenvironment within tissues enhances our understanding of biological processes. Ideally, a broad range of biomolecules should be analyzed in...

🏷️ 20 RRIDs

Locus coeruleus injury modulates ventral midbrain neuroinflammation during DSS-induced colitis.

Research square 2024

Abstract Parkinson’s disease (PD) is characterized by a decades-long prodrome, consisting of a collection of non-motor symptoms that emerges prior to the motor manifestation of...

Innovative Technologies for Kidney Research: Three-Dimensional Imaging and Quantification.

Seminars in nephrology 2026 📊 1

Image analysis has played a critical role in our understanding of kidney morphology, function, and disease. This analysis has been historically limited to visualizing defined...

Hemispheric Asymmetry of Intracortical Myelin Orientation in the Mouse Auditory Cortex.

The European journal of neuroscience 2025 📊 3

ABSTRACT Communication sound processing in mouse AC is lateralized. Both left and right AC are highly specialised and differ in auditory stimulus representation, functional connectivity...

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3D exploration of gene expression in chicken embryos through combined RNA fluorescence in situ hybridization, immunofluorescence, and clearing.

BMC biology 2024 📊 3

Abstract Background Fine characterization of gene expression patterns is crucial to understand many aspects of embryonic development. The chicken embryo is a well-established and valuable...

🏷️ 3 RRIDs

Collagen crosslinking-induced corneal morphological changes: a three-dimensional light sheet Microscopy-based evaluation.

Scientific reports 2024 📊 2

AbstractStiffness-related eye diseases such as keratoconus require comprehensive visualization of the complex morphological matrix changes. The aim of this study was to use three-dimensional (3D)...

FlyClear: A Tissue-Clearing Technique for High-Resolution Microscopy of Drosophila.

Methods in molecular biology (Clifton, N.J.) 2022 📊 2

Fluorescently labeled transgenic lines of Drosophila melanogaster are a powerful routine tool in fly laboratories. The possibility to fluorescently visualize individual cell populations or entire...

3D Imaging Reveals Changes in the Neurovascular Architecture of the Murine Calvarium with Aging.

bioRxiv : the preprint server for biology 2024 📊 2

Abstract Calvarial nerves, along with vasculature, influence skull formation during development and following injury, but it remains unclear how calvarial nerves are spatially distributed during...

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Arterial specification precedes microvascular restitution in the peri-infarct cortex that is driven by small microvessels.

Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism 2025 📊 2

Evaluation of microvascular networks was impeded until recently by the need of histological tissue sectioning, which precluded 3D analyses. Using light-sheet microscopy, we investigated microvascular...

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Sex-and Stress-Dependent Plasticity of a Corticotropin Releasing Hormone / GABA Projection from the Basolateral Amygdala to Nucleus Accumbens that Mediates Reward Behaviors.

bioRxiv : the preprint server for biology 2024 📊 2

Background: Motivated behaviors are executed by refined brain circuits. Early-life adversity (ELA) is a risk for human affective disorders involving dysregulated reward behaviors. In mice,...

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