Zeiss Axio Imager

Zeiss Axio Imager

Microscope • 104 papers

Plasmodium ARK2-EB1 axis drives the unconventional spindle dynamics, scaffold formation and chromosome segregation of sexual transmission stages.

Research square 2023 📊 1

Abstract Mechanisms of cell division are remarkably diverse, suggesting the underlying molecular networks among eukaryotes differ extensively. The Aurora family of kinases orchestrates the process...

Confocal Laser Scanning MicroscopyDeconvolution MicroscopyDifferential Interference Contrast MicroscopyFluorescence MicroscopyImmunofluorescence MicroscopyLive Cell ImagingOptical SectioningStimulated Emission Depletion MicroscopyStructured Illumination MicroscopySuper-Resolution MicroscopyZ-Stack ImagingZeiss Axio ImagerZeiss ElyraPlasmodium falciparumAxioVisionLAS XLeica Application Suite XZENAlexa Fluor 594ATTO 594Cy3DAPIGFPHoechst 33342mCherryElectroporationFixationImmunofluorescenceKnockdownKnockoutLive ImagingParaformaldehyde FixationPermeabilizationTransfectionZeiss Axio ImagerZeiss ElyraIcyAxioVisionLAS XLeica Application Suite XZENGraphPad PrismR900 UniversityFrancis Crick InstituteUniversity AveUniversity of California RiversideUniversity of GenevaUniversity of GroningenUniversity of LeicesterUniversity of NottinghamUniversity of WarwickAbcamCorningibidiInvitrogenMatTekMerckNew England BiolabsRocheSigma-AldrichDonkeyGoatMouseRabbit100x/1.4 NAZeiss C-Apochromat 63x
💻 Code 💾 Data 🏷️ 1 RRID

VNC-Dist: A machine learning-based semi-automated pipeline for quantification of neuronal position in the C. elegans ventral nerve cord.

PloS one 2025 📊 1

The C. elegans ventral nerve cord (VNC) provides a genetically tractable model for investigating the developmental mechanisms involved in neuronal positioning and organization. The VNC...

Fluorescence MicroscopyWidefield Fluorescence MicroscopyZ-Stack ImagingZeiss Axio ImagerCaenorhabditis elegansmCherrymNeonGreenmScarletClustered Regularly Interspaced Short Palindromic RepeatsPrimary Epithelial CellsZeiss Axio Imagerscikit-imageExcelPythonOttawa HospitalUniversity of OttawaAddgeneNew England BiolabsZeiss 40x/1.4 NA oil
💻 Code 💾 Data 🏷️ 1 RRID

Protocol to characterize mouse dural mast cells by flow cytometry and immunofluorescence.

STAR protocols 2024 📊 1

Mast cells, which constitute tissue-resident immune cells, are distributed in the dural meninges. Here, we provide procedural guidelines for investigating mouse dural mast cells using...

Confocal Laser Scanning MicroscopyImmunofluorescence MicroscopyZ-Stack ImagingZeiss Axio ImagerNIS-ElementsScanImageAlexa Fluor 488Alexa Fluor 568BV421BV605BV711Cy5Cy7Hoechst 33342PerCPBlockingFixationImmunofluorescencePermeabilizationWhole MountZeiss Axio ImagerNIS-ElementsScanImageHarvard Medical SchoolMassachusetts General HospitalMassachusetts General Hospital and Harvard Medical SchoolDonkeyGoatRabbitSTAR Protocols
📋 1 🏷️ 17 RRIDs

Immuno-localization of definitive hematopoietic stem cells in the vascular niche of mouse fetal liver.

STAR protocols 2022 📊 1

Understanding the murine fetal liver (FL) hematopoietic microenvironment, which promotes HSC proliferation, warrants identifying innate relationships between stem cells and the niche. An inclusive study...

Confocal Laser Scanning MicroscopyZ-Stack ImagingZeiss Axio ImagerZeiss LSM 880Alexa Fluor 405Alexa Fluor 488Alexa Fluor 594Alexa Fluor 647APCFITCGFPHoechst 33342YFPBlockingCell CultureCryosectioningFixationImmunohistochemistryImmunostainingPermeabilizationHematopoietic Stem CellsPrimary Endothelial CellsPrimary MacrophagesZeiss Axio ImagerZeiss LSM 880ImarisMATLABIndian Institute of Science Education and Research ThiruvananthapuramDonkeyGoatHamsterSTAR ProtocolsPMTZeiss Plan-Apochromat 63xZeiss Plan-Apochromat 63x oil
💻 Code 💾 Data 🏷️ 22 RRIDs

Apicortin defines the Plasmodium apical conoid body but is dispensable for the parasite life cycle.

Life science alliance 2026

Apicomplexan parasites such as Plasmodium spp. and Toxoplasma gondii possess unique tubulin-based structures, including subpellicular microtubules and apical polar rings, which are essential for parasite...

Differential Interference Contrast MicroscopyExpansion MicroscopyLive Cell ImagingStructured Illumination MicroscopyZ-Stack ImagingZeiss Axio ImagerZeiss ElyraCaenorhabditis elegansDrosophila melanogasterHomo sapiensPlasmodium falciparumAxioVisionZENZEN LiteCy3GFPHoechst 33342mCherryElectroporationExpansion MicroscopyFixationKnockoutLive ImagingParaformaldehyde FixationTransfectionZeiss Axio ImagerZeiss ElyraAxioVisionZENZEN LiteGraphPad PrismFrancis Crick InstituteUniversity of LondonUniversity of NottinghamCorningGibcoSigma-AldrichThermo Fisher ScientificZeiss Plan-Apochromat 63x

Determining biocide efficacy for treating established sulfate-reducing biofilms using flow cell systems.

Frontiers in microbiology 2025

Sulfate-reducing microorganisms (SRM) can contribute to souring and to the corrosion of infrastructure built to support many industrial operations, including in aquatic environments. While chemicals...

Confocal Laser Scanning MicroscopyMultiphoton MicroscopyZ-Stack ImagingZeiss Axio ImagerThorImageLSPropidium IodideSYTOZeiss Axio ImagerCellProfilerImageJThorImageLSRUniversity of CalgaryBiotiumInvitrogenSigma-AldrichThermo Fisher ScientificGaAsPOlympus 20x/1.0 NAZeiss 40x/0.8 NA
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Next-generation orange-to-far-red photoconvertible fluorescent protein for single-molecule microscopy and protein dynamic tracking.

Scientific reports 2025 📊 1

The PSmOrange and PSmOrange2 fluorescent proteins undergo irreversible photoconversion from the orange to far-red form under blue light, which makes them probes of choice for...

Confocal Laser Scanning MicroscopyLive Cell ImagingPhotoactivated Localization MicroscopySpinning Disk Confocal MicroscopyWidefield Fluorescence MicroscopyZeiss Axio ImagerIN CellCFPCy3EdUEGFPGFPmCherrymKate2mNeonGreenCell CultureFixationGlutaraldehydeLive ImagingParaformaldehyde FixationTransfectionHeLa (Henrietta Lacks)Zeiss Axio ImagerImageJIN CellPythonMoscow Institute of Physics and TechnologyNational Research CenterOvchinnikov Institute of Bioorganic ChemistryWestlake Institute for Advanced StudyWestlake Laboratory of Life Sciences and BiomedicineWestlake UniversityGibcoInvitrogenPromegaSigma-AldrichThermo Fisher ScientificCoherent OBIS 488diodePhotometrics CCDsCMOS100x/1.5 NAOlympus 60x/1.4 NA oilOlympus UPlanSApo 100x/1.4 NA oilZeiss 63x/1.4 NA oil470/30 bandpass545/30 bandpass620/60 bandpass685/40 bandpassAndor 550/25 bandpassAndor 605/70 bandpassChroma at 463/16Chroma at 463/17Chroma at 620/60Chroma at 700/75Chroma ET700/75mPhotometrics 545/30 bandpass
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PLAA/UFD-3 regulates P-bodies through its intrinsic disordered domain.

Proceedings of the National Academy of Sciences of the United States of America 2025 📊 2

Regulation of proteome homeostasis is crucial for the survival and adaptation to changing environments for all species. In eukaryotes, this process is finely tuned through...

Differential Interference Contrast MicroscopyZ-Stack ImagingZeiss Axio ImagerCaenorhabditis elegansEscherichia coliDsRedGFPmCherryClustered Regularly Interspaced Short Palindromic RepeatsFixationKnockoutEmbryonic Stem CellZeiss Axio ImagerFijiExcelPythonRCalifornia Institute of TechnologyAgilentCell Signaling TechnologyCytivaMerckMilliporeNew England BiolabsThermo Fisher Scientific
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Uterine collagen deposition fluctuates throughout the estrous cycle and provides a scaffold for gland visualization via the SHG-casting method.

iScience 2025

Uterine extracellular matrix (ECM) and uterine glands are essential parts of the endometrium, with important roles in remodeling associated with the estrous cycle, fertility, and...

3D ImagingMultiphoton MicroscopySecond Harmonic GenerationZ-Stack ImagingLeica StellarisLeica STELLARIS 8Leica STELLARIS 8 DIVENikon A1Zeiss Axio ImagerLAS XNIS-ElementsZENAlexa Fluor 594BlockingClear Unobstructed Brain Imaging Cocktails and Computational analysisFixationHematoxylin and EosinImmunohistochemistryParaffin EmbeddingParaformaldehyde FixationLeica StellarisLeica STELLARIS 8Leica STELLARIS 8 DIVENikon A1Zeiss Axio ImagerFijiImageJImarisLAS XNIS-ElementsZENGraphPad PrismUniversity of OuluJackson ImmunoResearchDonkeyRabbitCoherent Chameleon DiscoveryTi:SapphireLeica HyDLeica HyD XApochromat 25XZeiss PlanNeofluar 40x
💻 Code 💾 Data 🏷️ 6 RRIDs

A correlation-based tool for quantifying membrane periodic skeleton associated periodicity.

Frontiers in neuroinformatics 2025 📊 2

INTRODUCTION: The advent of super-resolution microscopy revealed the membrane-associated periodic skeleton (MPS), a specialized neuronal cytoskeletal structure composed of actin rings spaced 190 nm apart...

Deconvolution MicroscopyStimulated Emission Depletion MicroscopySuper-Resolution MicroscopyZeiss Axio ImagerBlockingFixationZeiss Axio ImagerHuygensnapariPythonUniversity of CopenhagenSigma-AldrichThermo Fisher ScientificVWRMouseRabbit
💻 Code 💾 Data 🏷️ 8 RRIDs

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