Danio rerio

Danio rerio

Organism • 367 papers

🔥 High Impact

Human histone deacetylase 6 shows strong preference for tubulin dimers over assembled microtubules.

Scientific reports 2017 📊 73

AbstractHuman histone deacetylase 6 (HDAC6) is the major deacetylase responsible for removing the acetyl group from Lys40 of α-tubulin (αK40), which is located lumenally in...

A transgenic zebrafish for direct optogenetic activation of FGF/ERK signaling.

bioRxiv : the preprint server for biology 2026

ABSTRACT Dynamic FGF/ERK signaling plays key roles in development, regeneration, and disease. We recently developed a zebrafish-optimized optogenetic tool, bOpto-FGF, that enables reversible activation of...

Non-Invasive Regional Neurochemical Profiling of Zebrafish Brain Using Localized Magnetic Resonance Spectroscopy at 28.2 T.

Molecules (Basel, Switzerland) 2025

Localized 1H magnetic resonance spectroscopy (MRS) is a powerful tool in pre-clinical and clinical neurological research, offering non-invasive insight into neurochemical composition in localized brain...

Normal locomotion in zebrafish lacking the sodium channel NaV1.4 suggests that the need for muscle action potentials is not universal.

PLoS biology 2025

Extensive studies over decades have firmly established the concept that action potentials (APs) in muscles are indispensable for muscle contraction. To re-examine the significance of...

Machine Learning-Assisted Quantification of Organelle Abundance.

Bio-protocol 2026

Organelle abundance is a key microscopic readout of organelle formation and, in many cases, function. Quantification of organelle abundance using confocal microscopy requires estimating their...

The homeodomain transcription factor Phox2 in the stellate ganglion of the squid Loligo pealei.

Biology open 2015

ABSTRACTHomeodomain transcription factors regulate development of embryos and cellular physiology in adult systems. Paired-type homeodomain genes constitute a subclass that has been particularly implicated in...

Visualizing Ocular Morphogenesis by Lightsheet Microscopy Using rx3:GFP Transgenic Zebrafish.

Journal of visualized experiments : JoVE 2021

Vertebrate eye development is a complex process that begins near the end of embryo gastrulation and requires the precise coordination of cell migration, proliferation, and...

Molecular Dynamics Simulations with NAMD and Trajectory Analysis.

Methods in molecular biology (Clifton, N.J.) 2026

Molecular simulations offer a window into proteins' movements, which other methods fail to measure. The fractional, slight modifications of structure seen, for example, in molecular...

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