MesoSPIM Light Sheet Microscopy

MesoSPIM Light Sheet Microscopy

Technique β€’ 29 papers

Protocol for reproducible EZ clearing and labeling, including optimized steps and quantified fluorescence retention on mouse tissue.

STAR protocols 2025 πŸ“Š 1

Here, we present a protocol for preserving fluorescent markers using tissue clearing and immunolabeling in mouse tissue such as sciatic nerve, gut, and spinal cord....

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Mechanical de-skewing enables high-resolution imaging of thin tissue slices with a mesoSPIM light-sheet microscope.

Biomedical optics express 2026

Optical clearing combined with light-sheet microscopy enables high-resolution imaging of extended tissue at scale. However, standard mesoSPIM systems are optimised for intact organs and are...

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A high-resolution, easy-to-build light-sheet microscope for subcellular imaging.

eLife 2026 πŸ“Š 1

Although several open-source, easy-to-assemble light-sheet microscope platforms already existβ€”such as mesoSPIM, OpenSPIM, and OpenSpinβ€”they are optimized for imaging large specimens and lack the resolution required...

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DEVILS: a tool for the visualization of large datasets with a high dynamic range.

F1000Research 2020 πŸ“Š 1

The number of grey values that can be displayed on monitors and be processed by the human eye is smaller than the dynamic range of...

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Pythia: Non-random DNA repair allows predictable CRISPR/Cas9 integration and gene editing.

bioRxiv : the preprint server for biology 2024 πŸ“Š 1

Summary CRISPR-based genome engineering holds enormous promise for basic science and therapeutic applications. Integrating and editing DNA sequences is still challenging in many cellular contexts,...

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A review of light-field imaging in biomedical sciences.

Med-X 2025 πŸ“Š 1

Abstract Light-field imaging is an emerging paradigm in biomedical optics, offering the unique ability to capture volumetric information in a single snapshot by encoding both...

Volumetric atlas of the rat inner ear from microCT and iDISCO+ cleared temporal bones.

PeerJ 2025 πŸ“Š 2

Background Volumetric atlases are an invaluable tool in neuroscience and otolaryngology, greatly aiding experiment planning and surgical interventions, as well as the interpretation of experimental...

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Impact of aging on anterior segment morphology and aqueous humor dynamics in human Eyes: Advanced imaging and computational techniques.

Biocybernetics and biomedical engineering 2025 πŸ“Š 2

OBJECTIVE: Aging results in significant structural and functional changes in the anterior segment of the eye, influencing intraocular pressure (IOP) and overall ocular health. Although...

Brain-wide input-output analysis of tuberal nucleus somatostatin neurons reveals hierarchical circuits for orchestrating feeding behavior.

Nature communications 2025 πŸ“Š 2

Feeding is an innate behavior critical for survival but is also influenced by many non-nutritional factors such as emotion, social context and environmental conditions. Recently,...

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