MesoSPIM

MesoSPIM

Microscope • 30 papers

Developmental divergence of sensory stimulus representation in cortical interneurons.

Nature communications 2020 📊 27

Abstract Vasocative-intestinal-peptide (VIP + ) and somatostatin (SST + ) interneurons are involved in modulating barrel cortex activity and perception during active whisking. Here we...

Deep learning is widely applicable to phenotyping embryonic development and disease.

Development (Cambridge, England) 2021 📊 28

ABSTRACT Genome editing simplifies the generation of new animal models for congenital disorders. However, the detailed and unbiased phenotypic assessment of altered embryonic development remains...

💻 Code 💾 Data 🏷️ 2 RRIDs

Benchtop mesoSPIM: a next-generation open-source light-sheet microscope for cleared samples.

Nature communications 2024 📊 33

Abstract In 2015, we launched the mesoSPIM initiative, an open-source project for making light-sheet microscopy of large cleared tissues more accessible. Meanwhile, the demand for...

💻 Code 💾 Data

Astrocyte dysfunction increases cortical dendritic excitability and promotes cranial pain in familial migraine.

Science advances 2020 📊 36

Astrocytes are essential contributors to neuronal function. As a consequence, disturbed astrocyte-neuron interactions are involved in the pathophysiology of several neurological disorders, with a strong...

🏷️ 6 RRIDs

Tissue clearing and 3D imaging in developmental biology.

Development (Cambridge, England) 2021 📊 42

ABSTRACT Tissue clearing increases the transparency of late developmental stages and enables deep imaging in fixed organisms. Successful implementation of these methodologies requires a good...

🔥 High Impact

A guidebook for DISCO tissue clearing.

Molecular systems biology 2021 📊 80

Abstract Histological analysis of biological tissues by mechanical sectioning is significantly time‐consuming and error‐prone due to loss of important information during sample slicing. In the...

🔥 High Impact

Tutorial: practical considerations for tissue clearing and imaging.

Nature protocols 2021 📊 84

Tissue clearing has become a powerful technique for studying anatomy and morphology at scales ranging from entire organisms to subcellular features. With the recent proliferation...

⭐ Foundational

Neuroinflammation-Associated Aspecific Manipulation of Mouse Predator Fear by Toxoplasma gondii.

Cell reports 2020 📊 120

In rodents, the decrease of felid aversion induced by Toxoplasma gondii, a phenomenon termed fatal attraction, is interpreted as an adaptive manipulation by the neurotropic protozoan...

💾 Data
⭐ Foundational

Light-sheet microscopy of cleared tissues with isotropic, subcellular resolution.

Nature methods 2019 📊 162

We present cleared-tissue axially swept light-sheet microscopy (ctASLM), which enables isotropic, subcellular resolution imaging with high optical sectioning capability and a large field of view...

⭐ Foundational

The mesoSPIM initiative: open-source light-sheet microscopes for imaging cleared tissue.

Nature methods 2019 📊 282

Light-sheet microscopy is an ideal technique for imaging large cleared samples; however, the community is still lacking instruments capable of producing volumetric images of centimeter-sized...

💾 Data

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